Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Gm27389-201ENSMUST00000183622 195 ntBASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Gm33142-201ENSMUST00000193913 867 ntBASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgb5Q91XX5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhgb5Q91XX5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhgb5Q91XX5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhgb5Q91XX5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhgb5Q91XX5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhgb5Q91XX5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Gm14859-201ENSMUST00000117752 357 ntBASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Gm6345-202ENSMUST00000180900 204 ntBASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Gm9731-201ENSMUST00000209480 747 ntBASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgb5Q91XX5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Gm10819-201ENSMUST00000099988 561 ntBASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb5Q91XX5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb5Q91XX5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb5Q91XX5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb5Q91XX5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb5Q91XX5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.3■□□□□ 0.36
Pcdhgb5Q91XX5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pcdhgb5Q91XX5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb5Q91XX5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb5Q91XX5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms