Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trex1Q91XB0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trex1Q91XB0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trex1Q91XB0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.05■□□□□ 0.8
Trex1Q91XB0 Ank2-226ENSMUST00000189368 339 ntBASIC20.05■□□□□ 0.8
Trex1Q91XB0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trex1Q91XB0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Trex1Q91XB0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trex1Q91XB0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Trex1Q91XB0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Mir8112-201ENSMUST00000184382 131 ntBASIC20.04■□□□□ 0.8
Trex1Q91XB0 Gm5587-201ENSMUST00000206270 674 ntBASIC20.04■□□□□ 0.8
Trex1Q91XB0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trex1Q91XB0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trex1Q91XB0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.03■□□□□ 0.8
Trex1Q91XB0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trex1Q91XB0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trex1Q91XB0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trex1Q91XB0 Gm7284-201ENSMUST00000131667 944 ntBASIC20.03■□□□□ 0.8
Trex1Q91XB0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trex1Q91XB0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trex1Q91XB0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Grk6-206ENSMUST00000224995 2971 ntBASIC20.02■□□□□ 0.8
Trex1Q91XB0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Trex1Q91XB0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trex1Q91XB0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trex1Q91XB0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trex1Q91XB0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trex1Q91XB0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trex1Q91XB0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.02■□□□□ 0.79
Trex1Q91XB0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.01■□□□□ 0.79
Trex1Q91XB0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Gm10566-201ENSMUST00000086739 996 ntBASIC20.01■□□□□ 0.79
Trex1Q91XB0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trex1Q91XB0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 Gm43272-201ENSMUST00000200599 1584 ntBASIC20■□□□□ 0.79
Trex1Q91XB0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20■□□□□ 0.79
Trex1Q91XB0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Trex1Q91XB0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 Gm9013-201ENSMUST00000132939 882 ntBASIC20■□□□□ 0.79
Trex1Q91XB0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trex1Q91XB0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trex1Q91XB0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Gm29518-201ENSMUST00000190858 372 ntBASIC19.99■□□□□ 0.79
Trex1Q91XB0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trex1Q91XB0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms