Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Gm29791-202ENSMUST00000207888 369 ntBASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40bQ8VHP8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40bQ8VHP8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40bQ8VHP8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40bQ8VHP8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40bQ8VHP8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40bQ8VHP8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.74■□□□□ 0.11
Rab40bQ8VHP8 Gm6420-201ENSMUST00000193885 723 ntBASIC15.74■□□□□ 0.11
Rab40bQ8VHP8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.74■□□□□ 0.11
Rab40bQ8VHP8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40bQ8VHP8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40bQ8VHP8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Gm10418-201ENSMUST00000100943 576 ntBASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Nespas-201ENSMUST00000143738 1083 ntBASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40bQ8VHP8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.71■□□□□ 0.11
Rab40bQ8VHP8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms