Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Gm6659-201ENSMUST00000174752 547 ntBASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Fst-202ENSMUST00000223640 2612 ntBASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Mir5130-201ENSMUST00000175160 84 ntBASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdhr1Q8VHP6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Gm7638-201ENSMUST00000121348 967 ntBASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdhr1Q8VHP6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Gm18032-201ENSMUST00000222541 538 ntBASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdhr1Q8VHP6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdhr1Q8VHP6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdhr1Q8VHP6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cdhr1Q8VHP6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdhr1Q8VHP6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdhr1Q8VHP6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Gm10013-201ENSMUST00000106074 672 ntBASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cdhr1Q8VHP6 Gm7791-201ENSMUST00000219066 539 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms