Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
HnrnpuQ8VEK3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HnrnpuQ8VEK3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HnrnpuQ8VEK3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
HnrnpuQ8VEK3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HnrnpuQ8VEK3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HnrnpuQ8VEK3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HnrnpuQ8VEK3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.78■■□□□ 1.08
HnrnpuQ8VEK3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Gm42545-201ENSMUST00000202755 922 ntBASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HnrnpuQ8VEK3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HnrnpuQ8VEK3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
HnrnpuQ8VEK3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.77■■□□□ 1.07
HnrnpuQ8VEK3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.76■■□□□ 1.07
HnrnpuQ8VEK3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HnrnpuQ8VEK3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
HnrnpuQ8VEK3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Gm5643-201ENSMUST00000117081 966 ntBASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HnrnpuQ8VEK3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Gm12382-201ENSMUST00000122005 922 ntBASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HnrnpuQ8VEK3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms