Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Gm2651-201ENSMUST00000203560 838 ntBASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lmcd1Q8VEE1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lmcd1Q8VEE1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lmcd1Q8VEE1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lmcd1Q8VEE1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lmcd1Q8VEE1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lmcd1Q8VEE1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lmcd1Q8VEE1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lmcd1Q8VEE1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lmcd1Q8VEE1 Gm15372-201ENSMUST00000120729 834 ntBASIC18.58■□□□□ 0.56
Lmcd1Q8VEE1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.58■□□□□ 0.56
Lmcd1Q8VEE1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lmcd1Q8VEE1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.58■□□□□ 0.56
Lmcd1Q8VEE1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lmcd1Q8VEE1 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lmcd1Q8VEE1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Gm1401-201ENSMUST00000122048 772 ntBASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lmcd1Q8VEE1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Rps4l-201ENSMUST00000071745 943 ntBASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.55■□□□□ 0.56
Lmcd1Q8VEE1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lmcd1Q8VEE1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Gm8000-201ENSMUST00000188378 592 ntBASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Gm2213-201ENSMUST00000197485 688 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms