Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.04■□□□□ 0.48
Uhrf1Q8VDF2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Uhrf1Q8VDF2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Uhrf1Q8VDF2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Uhrf1Q8VDF2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Uhrf1Q8VDF2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Uhrf1Q8VDF2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Gm37722-201ENSMUST00000193757 208 ntBASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Uhrf1Q8VDF2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uhrf1Q8VDF2 Mir770-201ENSMUST00000103252 94 ntBASIC18.02■□□□□ 0.48
Uhrf1Q8VDF2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uhrf1Q8VDF2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.02■□□□□ 0.48
Uhrf1Q8VDF2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Uhrf1Q8VDF2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.02■□□□□ 0.48
Uhrf1Q8VDF2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uhrf1Q8VDF2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Uhrf1Q8VDF2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.02■□□□□ 0.47
Uhrf1Q8VDF2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.02■□□□□ 0.47
Uhrf1Q8VDF2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Uhrf1Q8VDF2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Uhrf1Q8VDF2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Uhrf1Q8VDF2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Uhrf1Q8VDF2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Uhrf1Q8VDF2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Uhrf1Q8VDF2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uhrf1Q8VDF2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Uhrf1Q8VDF2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uhrf1Q8VDF2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Gm44771-201ENSMUST00000206975 626 ntBASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Gm45328-201ENSMUST00000210942 917 ntBASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Gm18115-201ENSMUST00000221209 621 ntBASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Uhrf1Q8VDF2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Uhrf1Q8VDF2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Uhrf1Q8VDF2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Uhrf1Q8VDF2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Uhrf1Q8VDF2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.97■□□□□ 0.47
Uhrf1Q8VDF2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Uhrf1Q8VDF2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Uhrf1Q8VDF2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms