Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm1Q8VC85 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.77■□□□□ 0.27
Lsm1Q8VC85 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm1Q8VC85 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.76■□□□□ 0.27
Lsm1Q8VC85 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm1Q8VC85 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm1Q8VC85 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lsm1Q8VC85 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Mir6349-201ENSMUST00000184059 97 ntBASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Gm5408-201ENSMUST00000197998 747 ntBASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.73■□□□□ 0.27
Lsm1Q8VC85 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Gm2559-201ENSMUST00000201323 363 ntBASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Gm4968-201ENSMUST00000071458 858 ntBASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm1Q8VC85 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Gm11643-201ENSMUST00000119578 864 ntBASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms