Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm2559-201ENSMUST00000201323 363 ntBASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Gm4968-201ENSMUST00000071458 858 ntBASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps39Q8R5L3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.52■□□□□ 0.39
Vps39Q8R5L3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vps39Q8R5L3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps39Q8R5L3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps39Q8R5L3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vps39Q8R5L3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Vps39Q8R5L3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Mir2861-201ENSMUST00000175539 82 ntBASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Gm10602-201ENSMUST00000098239 609 ntBASIC17.51■□□□□ 0.39
Vps39Q8R5L3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps39Q8R5L3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps39Q8R5L3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.49■□□□□ 0.39
Vps39Q8R5L3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.49■□□□□ 0.39
Vps39Q8R5L3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vps39Q8R5L3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Mir6349-201ENSMUST00000184059 97 ntBASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Mir8112-201ENSMUST00000184382 131 ntBASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps39Q8R5L3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms