Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Gm37856-201ENSMUST00000191634 999 ntBASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim29Q8R2Q0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Gm12527-201ENSMUST00000117967 564 ntBASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim29Q8R2Q0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim29Q8R2Q0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim29Q8R2Q0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim29Q8R2Q0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Gm13401-201ENSMUST00000117074 291 ntBASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim29Q8R2Q0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms