Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zcchc9Q8R1J3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Zcchc9Q8R1J3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Gm10517-202ENSMUST00000192970 758 ntBASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.4■□□□□ 0.38
Zcchc9Q8R1J3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Zcchc9Q8R1J3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Zcchc9Q8R1J3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Zcchc9Q8R1J3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Gm23634-201ENSMUST00000175071 91 ntBASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Gm27463-201ENSMUST00000183569 57 ntBASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.39■□□□□ 0.37
Zcchc9Q8R1J3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zcchc9Q8R1J3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms