Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Gm12251-201ENSMUST00000117893 792 ntBASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Gm9959-201ENSMUST00000068277 390 ntBASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim2Q8R1G6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim2Q8R1G6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.08■□□□□ 0.81
Pdlim2Q8R1G6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdlim2Q8R1G6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdlim2Q8R1G6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdlim2Q8R1G6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdlim2Q8R1G6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdlim2Q8R1G6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim2Q8R1G6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Smad6-203ENSMUST00000179458 273 ntBASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim2Q8R1G6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms