Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Gm11643-201ENSMUST00000119578 864 ntBASIC16.5■□□□□ 0.23
Clrn1Q8K445 Gm13168-201ENSMUST00000121771 632 ntBASIC16.5■□□□□ 0.23
Clrn1Q8K445 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.5■□□□□ 0.23
Clrn1Q8K445 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.49■□□□□ 0.23
Clrn1Q8K445 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.49■□□□□ 0.23
Clrn1Q8K445 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Gm27011-201ENSMUST00000182352 972 ntBASIC16.49■□□□□ 0.23
Clrn1Q8K445 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.49■□□□□ 0.23
Clrn1Q8K445 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn1Q8K445 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn1Q8K445 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Gm13401-201ENSMUST00000117074 291 ntBASIC16.48■□□□□ 0.23
Clrn1Q8K445 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn1Q8K445 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn1Q8K445 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn1Q8K445 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Gm15378-201ENSMUST00000121894 207 ntBASIC16.47■□□□□ 0.23
Clrn1Q8K445 Gm12382-201ENSMUST00000122005 922 ntBASIC16.47■□□□□ 0.23
Clrn1Q8K445 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn1Q8K445 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.47■□□□□ 0.23
Clrn1Q8K445 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Clrn1Q8K445 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.47■□□□□ 0.23
Clrn1Q8K445 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn1Q8K445 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.47■□□□□ 0.23
Clrn1Q8K445 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Clrn1Q8K445 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.46■□□□□ 0.23
Clrn1Q8K445 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn1Q8K445 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.46■□□□□ 0.23
Clrn1Q8K445 Gm6576-201ENSMUST00000169678 883 ntBASIC16.46■□□□□ 0.23
Clrn1Q8K445 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.46■□□□□ 0.23
Clrn1Q8K445 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms