Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lin28aQ8K3Y3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lin28aQ8K3Y3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lin28aQ8K3Y3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lin28aQ8K3Y3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lin28aQ8K3Y3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Lin28aQ8K3Y3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lin28aQ8K3Y3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lin28aQ8K3Y3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lin28aQ8K3Y3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lin28aQ8K3Y3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lin28aQ8K3Y3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lin28aQ8K3Y3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lin28aQ8K3Y3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Gm43799-201ENSMUST00000201845 579 ntBASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Gm4974-201ENSMUST00000209974 875 ntBASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lin28aQ8K3Y3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lin28aQ8K3Y3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Odf3b-204ENSMUST00000227834 930 ntBASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lin28aQ8K3Y3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Gm10418-201ENSMUST00000100943 576 ntBASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Gm9987-201ENSMUST00000069768 567 ntBASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lin28aQ8K3Y3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.29■□□□□ 0.2
Lin28aQ8K3Y3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lin28aQ8K3Y3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms