Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cnot6Q8K3P5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cnot6Q8K3P5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cnot6Q8K3P5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cnot6Q8K3P5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cnot6Q8K3P5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cnot6Q8K3P5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cnot6Q8K3P5 Idnk-204ENSMUST00000226010 1898 ntBASIC17.16■□□□□ 0.34
Cnot6Q8K3P5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cnot6Q8K3P5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cnot6Q8K3P5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Cnot6Q8K3P5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Gm13148-201ENSMUST00000118892 745 ntBASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cnot6Q8K3P5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Gm12933-201ENSMUST00000120203 872 ntBASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Gm6211-202ENSMUST00000167849 925 ntBASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cnot6Q8K3P5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cnot6Q8K3P5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Mir5133-201ENSMUST00000174955 77 ntBASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cnot6Q8K3P5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.1■□□□□ 0.33
Cnot6Q8K3P5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cnot6Q8K3P5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cnot6Q8K3P5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cnot6Q8K3P5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms