Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn1Q8K0T0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.14■□□□□ 0.82
Rtn1Q8K0T0 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.14■□□□□ 0.82
Rtn1Q8K0T0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn1Q8K0T0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn1Q8K0T0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtn1Q8K0T0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn1Q8K0T0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms