Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Olfr129-201ENSMUST00000122318 993 ntBASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4rl1Q8K0S5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4rl1Q8K0S5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm45328-201ENSMUST00000210942 917 ntBASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm18115-201ENSMUST00000221209 621 ntBASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4rl1Q8K0S5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms