Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcll1Q8JZS7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcll1Q8JZS7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcll1Q8JZS7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.01■□□□□ 0.47
Hmgcll1Q8JZS7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcll1Q8JZS7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcll1Q8JZS7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcll1Q8JZS7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcll1Q8JZS7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18■□□□□ 0.47
Hmgcll1Q8JZS7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcll1Q8JZS7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgcll1Q8JZS7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcll1Q8JZS7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcll1Q8JZS7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcll1Q8JZS7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcll1Q8JZS7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Gm17661-201ENSMUST00000170317 270 ntBASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcll1Q8JZS7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Mir5130-201ENSMUST00000175160 84 ntBASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hmgcll1Q8JZS7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcll1Q8JZS7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.96■□□□□ 0.46
Hmgcll1Q8JZS7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcll1Q8JZS7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcll1Q8JZS7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.95■□□□□ 0.46
Hmgcll1Q8JZS7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.95■□□□□ 0.46
Hmgcll1Q8JZS7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcll1Q8JZS7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcll1Q8JZS7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcll1Q8JZS7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcll1Q8JZS7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Hmgcll1Q8JZS7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms