Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfwd3Q8CIK8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Gm10418-201ENSMUST00000100943 576 ntBASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Gm11643-201ENSMUST00000119578 864 ntBASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.42■□□□□ 0.22
Rfwd3Q8CIK8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfwd3Q8CIK8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Gm42545-201ENSMUST00000202755 922 ntBASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd3Q8CIK8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Rfwd3Q8CIK8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Gm37292-201ENSMUST00000192062 758 ntBASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd3Q8CIK8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms