Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne4Q8CII8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Gm34391-201ENSMUST00000203706 907 ntBASIC19.78■□□□□ 0.76
Syne4Q8CII8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Syne4Q8CII8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne4Q8CII8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.77■□□□□ 0.76
Syne4Q8CII8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.77■□□□□ 0.76
Syne4Q8CII8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Syne4Q8CII8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syne4Q8CII8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.77■□□□□ 0.76
Syne4Q8CII8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syne4Q8CII8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Syne4Q8CII8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Syne4Q8CII8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Syne4Q8CII8 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.76■□□□□ 0.75
Syne4Q8CII8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Syne4Q8CII8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syne4Q8CII8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Birc2-201ENSMUST00000054878 378 ntBASIC19.75■□□□□ 0.75
Syne4Q8CII8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Syne4Q8CII8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Gm28659-201ENSMUST00000188013 759 ntBASIC19.74■□□□□ 0.75
Syne4Q8CII8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.74■□□□□ 0.75
Syne4Q8CII8 Gm6443-201ENSMUST00000203599 874 ntBASIC19.74■□□□□ 0.75
Syne4Q8CII8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syne4Q8CII8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne4Q8CII8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne4Q8CII8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne4Q8CII8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne4Q8CII8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne4Q8CII8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.73■□□□□ 0.75
Syne4Q8CII8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.73■□□□□ 0.75
Syne4Q8CII8 Gm43514-201ENSMUST00000198852 424 ntBASIC19.73■□□□□ 0.75
Syne4Q8CII8 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.73■□□□□ 0.75
Syne4Q8CII8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms