Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rftn2Q8CHX7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rftn2Q8CHX7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rftn2Q8CHX7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rftn2Q8CHX7 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.58■□□□□ 0.57
Rftn2Q8CHX7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rftn2Q8CHX7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rftn2Q8CHX7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rftn2Q8CHX7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rftn2Q8CHX7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.57■□□□□ 0.56
Rftn2Q8CHX7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Gm18032-201ENSMUST00000222541 538 ntBASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rftn2Q8CHX7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rftn2Q8CHX7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Gm10013-201ENSMUST00000106074 672 ntBASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Rftn2Q8CHX7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rftn2Q8CHX7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms