Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Gm2274-201ENSMUST00000184539 609 ntBASIC17■□□□□ 0.31
Rdh1Q8CGV4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rdh1Q8CGV4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rdh1Q8CGV4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Mir8112-201ENSMUST00000184382 131 ntBASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Gm37025-201ENSMUST00000195159 829 ntBASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Gm45058-201ENSMUST00000205810 766 ntBASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rdh1Q8CGV4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Gm9731-201ENSMUST00000209480 747 ntBASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Grk6-206ENSMUST00000224995 2971 ntBASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rdh1Q8CGV4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Mir5130-201ENSMUST00000175160 84 ntBASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rdh1Q8CGV4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.96■□□□□ 0.3
Rdh1Q8CGV4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rdh1Q8CGV4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh1Q8CGV4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms