Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Mir8112-201ENSMUST00000184382 131 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44357-201ENSMUST00000195897 142 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm19658-201ENSMUST00000196231 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44367-201ENSMUST00000196836 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44350-201ENSMUST00000197197 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44390-201ENSMUST00000197533 144 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44313-201ENSMUST00000198018 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44486-201ENSMUST00000198508 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44454-201ENSMUST00000198541 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44314-201ENSMUST00000199263 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44394-201ENSMUST00000199558 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44484-201ENSMUST00000199873 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44466-201ENSMUST00000200264 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm44359-201ENSMUST00000200671 138 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Rps4l-201ENSMUST00000071745 943 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.18■□□□□ 0.5
Rp1l1Q8CGM2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1l1Q8CGM2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Gm15372-201ENSMUST00000120729 834 ntBASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Gm12644-201ENSMUST00000119935 606 ntBASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rp1l1Q8CGM2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Iqck-206ENSMUST00000208658 2891 ntBASIC18.15■□□□□ 0.5
Rp1l1Q8CGM2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rp1l1Q8CGM2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rp1l1Q8CGM2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Gm11336-201ENSMUST00000118168 334 ntBASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Mir5126-201ENSMUST00000175513 77 ntBASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rp1l1Q8CGM2 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms