Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
ShfQ8CG80 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
ShfQ8CG80 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Gm11927-201ENSMUST00000118472 759 ntBASIC15.61■□□□□ 0.09
ShfQ8CG80 Gm13148-201ENSMUST00000118892 745 ntBASIC15.61■□□□□ 0.09
ShfQ8CG80 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ShfQ8CG80 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.61■□□□□ 0.09
ShfQ8CG80 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ShfQ8CG80 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.61■□□□□ 0.09
ShfQ8CG80 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.61■□□□□ 0.09
ShfQ8CG80 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShfQ8CG80 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ShfQ8CG80 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ShfQ8CG80 Gm11643-201ENSMUST00000119578 864 ntBASIC15.6■□□□□ 0.09
ShfQ8CG80 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.6■□□□□ 0.09
ShfQ8CG80 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.6■□□□□ 0.09
ShfQ8CG80 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ShfQ8CG80 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ShfQ8CG80 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShfQ8CG80 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ShfQ8CG80 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
ShfQ8CG80 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ShfQ8CG80 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ShfQ8CG80 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.59■□□□□ 0.09
ShfQ8CG80 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ShfQ8CG80 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.59■□□□□ 0.09
ShfQ8CG80 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ShfQ8CG80 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ShfQ8CG80 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.59■□□□□ 0.09
ShfQ8CG80 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Mir6349-201ENSMUST00000184059 97 ntBASIC15.59■□□□□ 0.09
ShfQ8CG80 Gm42569-201ENSMUST00000200539 472 ntBASIC15.59■□□□□ 0.09
ShfQ8CG80 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.59■□□□□ 0.09
ShfQ8CG80 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ShfQ8CG80 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ShfQ8CG80 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ShfQ8CG80 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.58■□□□□ 0.08
ShfQ8CG80 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
ShfQ8CG80 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ShfQ8CG80 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShfQ8CG80 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShfQ8CG80 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShfQ8CG80 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShfQ8CG80 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShfQ8CG80 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShfQ8CG80 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ShfQ8CG80 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShfQ8CG80 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ShfQ8CG80 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.57■□□□□ 0.08
ShfQ8CG80 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ShfQ8CG80 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms