Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc5Q8CG46 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smc5Q8CG46 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smc5Q8CG46 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smc5Q8CG46 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Smc5Q8CG46 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.64■■□□□ 1.06
Smc5Q8CG46 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Smc5Q8CG46 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smc5Q8CG46 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Smc5Q8CG46 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.64■■□□□ 1.06
Smc5Q8CG46 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.64■■□□□ 1.06
Smc5Q8CG46 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.64■■□□□ 1.05
Smc5Q8CG46 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Smc5Q8CG46 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc5Q8CG46 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.63■■□□□ 1.05
Smc5Q8CG46 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Smc5Q8CG46 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc5Q8CG46 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.62■■□□□ 1.05
Smc5Q8CG46 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc5Q8CG46 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smc5Q8CG46 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc5Q8CG46 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.6■■□□□ 1.05
Smc5Q8CG46 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc5Q8CG46 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc5Q8CG46 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc5Q8CG46 Gm11643-201ENSMUST00000119578 864 ntBASIC21.6■■□□□ 1.05
Smc5Q8CG46 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.6■■□□□ 1.05
Smc5Q8CG46 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc5Q8CG46 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc5Q8CG46 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc5Q8CG46 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Smc5Q8CG46 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc5Q8CG46 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.6■■□□□ 1.05
Smc5Q8CG46 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Gm42569-201ENSMUST00000200539 472 ntBASIC21.59■■□□□ 1.05
Smc5Q8CG46 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc5Q8CG46 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.58■■□□□ 1.05
Smc5Q8CG46 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc5Q8CG46 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc5Q8CG46 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.58■■□□□ 1.05
Smc5Q8CG46 Mir6349-201ENSMUST00000184059 97 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms