Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam228aQ8CDW1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam228aQ8CDW1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Gm7514-201ENSMUST00000209475 934 ntBASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam228aQ8CDW1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Gm10493-201ENSMUST00000097270 612 ntBASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fam228aQ8CDW1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam228aQ8CDW1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Fam228aQ8CDW1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fam228aQ8CDW1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Fam228aQ8CDW1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fam228aQ8CDW1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Fam228aQ8CDW1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fam228aQ8CDW1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fam228aQ8CDW1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Fam228aQ8CDW1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fam228aQ8CDW1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Gm29791-202ENSMUST00000207888 369 ntBASIC18.33■□□□□ 0.52
Fam228aQ8CDW1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms