Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rfx6Q8C7R7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.77■□□□□ 0.44
Rfx6Q8C7R7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfx6Q8C7R7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfx6Q8C7R7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfx6Q8C7R7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfx6Q8C7R7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Gm29791-202ENSMUST00000207888 369 ntBASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx6Q8C7R7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx6Q8C7R7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Gm6211-202ENSMUST00000167849 925 ntBASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.74■□□□□ 0.43
Rfx6Q8C7R7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx6Q8C7R7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx6Q8C7R7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx6Q8C7R7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx6Q8C7R7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rfx6Q8C7R7 Gm7290-201ENSMUST00000104990 617 ntBASIC17.73■□□□□ 0.43
Rfx6Q8C7R7 Gm12918-201ENSMUST00000120234 636 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms