Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.28■□□□□ 0.68
Trim9Q8C7M3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim9Q8C7M3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim9Q8C7M3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim9Q8C7M3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.27■□□□□ 0.67
Trim9Q8C7M3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trim9Q8C7M3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim9Q8C7M3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim9Q8C7M3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Gm4974-201ENSMUST00000209974 875 ntBASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim9Q8C7M3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Gm10517-202ENSMUST00000192970 758 ntBASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Trim9Q8C7M3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Trim9Q8C7M3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Gm13168-201ENSMUST00000121771 632 ntBASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim9Q8C7M3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms