Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.74■□□□□ 0.11
Col6a6Q8C6K9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a6Q8C6K9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a6Q8C6K9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a6Q8C6K9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a6Q8C6K9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Actl10-202ENSMUST00000226583 1501 ntBASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Gm6443-201ENSMUST00000203599 874 ntBASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Gm24589-201ENSMUST00000116692 94 ntBASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a6Q8C6K9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Tgds-204ENSMUST00000228543 1594 ntBASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a6Q8C6K9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Gm26039-201ENSMUST00000158152 144 ntBASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Gm24841-201ENSMUST00000158676 357 ntBASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Gm9731-201ENSMUST00000209480 747 ntBASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a6Q8C6K9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col6a6Q8C6K9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col6a6Q8C6K9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Gm27742-201ENSMUST00000184667 60 ntBASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Gm37722-201ENSMUST00000193757 208 ntBASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a6Q8C6K9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Mir8098-201ENSMUST00000184011 137 ntBASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col6a6Q8C6K9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms