Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc60Q8C4J0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc60Q8C4J0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc60Q8C4J0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ccdc60Q8C4J0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ccdc60Q8C4J0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 Gm8969-201ENSMUST00000199694 526 ntBASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc60Q8C4J0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc60Q8C4J0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Gm12085-201ENSMUST00000119263 940 ntBASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Mir5122-201ENSMUST00000175004 89 ntBASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc60Q8C4J0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Gm24841-201ENSMUST00000158676 357 ntBASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Gm43702-201ENSMUST00000198772 2546 ntBASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc60Q8C4J0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc60Q8C4J0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ccdc60Q8C4J0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ccdc60Q8C4J0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ccdc60Q8C4J0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms