Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim47Q8C0E3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim47Q8C0E3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim47Q8C0E3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim47Q8C0E3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Gm9987-201ENSMUST00000069768 567 ntBASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim47Q8C0E3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim47Q8C0E3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim47Q8C0E3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.35■□□□□ 0.69
Trim47Q8C0E3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Gm6433-201ENSMUST00000118634 875 ntBASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Gm7638-201ENSMUST00000121348 967 ntBASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.34■□□□□ 0.69
Trim47Q8C0E3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Rarb-207ENSMUST00000225921 2756 ntBASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.34■□□□□ 0.69
Trim47Q8C0E3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim47Q8C0E3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim47Q8C0E3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.33■□□□□ 0.69
Trim47Q8C0E3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim47Q8C0E3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim47Q8C0E3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim47Q8C0E3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trim47Q8C0E3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim47Q8C0E3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim47Q8C0E3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.32■□□□□ 0.68
Trim47Q8C0E3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim47Q8C0E3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim47Q8C0E3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim47Q8C0E3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim47Q8C0E3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim47Q8C0E3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim47Q8C0E3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim47Q8C0E3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms