Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lcmt2Q8BYR1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lcmt2Q8BYR1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lcmt2Q8BYR1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lcmt2Q8BYR1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lcmt2Q8BYR1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Lcmt2Q8BYR1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lcmt2Q8BYR1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lcmt2Q8BYR1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Gm4968-201ENSMUST00000071458 858 ntBASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lcmt2Q8BYR1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Gm2399-201ENSMUST00000104944 225 ntBASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Gm38285-201ENSMUST00000192928 922 ntBASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lcmt2Q8BYR1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Gm44549-201ENSMUST00000208351 577 ntBASIC16.31■□□□□ 0.2
Lcmt2Q8BYR1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms