Protein–RNA interactions for Protein: Q8BX70

Vps13c, Vacuolar protein sorting-associated protein 13C, mousemouse

Predictions only

Length 3,748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13cQ8BX70 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps13cQ8BX70 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps13cQ8BX70 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps13cQ8BX70 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.57■□□□□ 0.08
Vps13cQ8BX70 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps13cQ8BX70 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps13cQ8BX70 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13cQ8BX70 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps13cQ8BX70 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13cQ8BX70 Mir8098-201ENSMUST00000184011 137 ntBASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Gm5864-201ENSMUST00000202263 970 ntBASIC15.53■□□□□ 0.08
Vps13cQ8BX70 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Gm37722-201ENSMUST00000193757 208 ntBASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13cQ8BX70 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13cQ8BX70 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13cQ8BX70 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.52■□□□□ 0.08
Vps13cQ8BX70 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13cQ8BX70 Gm13884-201ENSMUST00000118103 829 ntBASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13cQ8BX70 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.52■□□□□ 0.07
Vps13cQ8BX70 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Gm24841-201ENSMUST00000158676 357 ntBASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13cQ8BX70 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms