Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.92■□□□□ 0.46
Suds3Q8BR65 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.91■□□□□ 0.46
Suds3Q8BR65 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Suds3Q8BR65 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.9■□□□□ 0.46
Suds3Q8BR65 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Suds3Q8BR65 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.89■□□□□ 0.45
Suds3Q8BR65 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.89■□□□□ 0.45
Suds3Q8BR65 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Gm10812-201ENSMUST00000099864 546 ntBASIC17.89■□□□□ 0.45
Suds3Q8BR65 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Suds3Q8BR65 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Suds3Q8BR65 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Suds3Q8BR65 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.87■□□□□ 0.45
Suds3Q8BR65 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms