Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Gm5643-201ENSMUST00000117081 966 ntBASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4Q8BQZ5 Flg-201ENSMUST00000050758 1488 ntBASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Mtag2-201ENSMUST00000058665 714 ntBASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4Q8BQZ5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4Q8BQZ5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Zfp783-201ENSMUST00000095946 670 ntBASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpsf4Q8BQZ5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms