Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm37292-201ENSMUST00000192062 758 ntBASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm4Q8BKA3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srrm4Q8BKA3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
Srrm4Q8BKA3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Mir1199-201ENSMUST00000117015 119 ntBASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Srrm4Q8BKA3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms