Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
Ccdc40Q8BI79 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ccdc40Q8BI79 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ccdc40Q8BI79 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ccdc40Q8BI79 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc40Q8BI79 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc40Q8BI79 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Gm2559-201ENSMUST00000201323 363 ntBASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Gm4968-201ENSMUST00000071458 858 ntBASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc40Q8BI79 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc40Q8BI79 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Gm11927-201ENSMUST00000118472 759 ntBASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc40Q8BI79 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc40Q8BI79 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc40Q8BI79 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc40Q8BI79 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms