Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Slc5a7Q8BGY9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Mir7075-201ENSMUST00000184187 82 ntBASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Gm9847-201ENSMUST00000052528 599 ntBASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc5a7Q8BGY9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc5a7Q8BGY9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc5a7Q8BGY9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc5a7Q8BGY9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Slc5a7Q8BGY9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms