Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim6Q8BGE7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Idnk-204ENSMUST00000226010 1898 ntBASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim6Q8BGE7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim6Q8BGE7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.54■□□□□ 0.56
Trim6Q8BGE7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.54■□□□□ 0.56
Trim6Q8BGE7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.53■□□□□ 0.56
Trim6Q8BGE7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim6Q8BGE7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim6Q8BGE7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim6Q8BGE7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms