Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16■□□□□ 0.15
Zc3hc1Q80YV2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Zc3hc1Q80YV2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zc3hc1Q80YV2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Mir8112-201ENSMUST00000184382 131 ntBASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Gm29791-202ENSMUST00000207888 369 ntBASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zc3hc1Q80YV2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zc3hc1Q80YV2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Gm7514-201ENSMUST00000209475 934 ntBASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.96■□□□□ 0.15
Zc3hc1Q80YV2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms