Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Gm27463-201ENSMUST00000183569 57 ntBASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf168Q80XJ2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf168Q80XJ2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Gm12085-201ENSMUST00000119263 940 ntBASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Gm18959-201ENSMUST00000208954 655 ntBASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf168Q80XJ2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf168Q80XJ2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf168Q80XJ2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Rnf168Q80XJ2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rnf168Q80XJ2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf168Q80XJ2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf168Q80XJ2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf168Q80XJ2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf168Q80XJ2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf168Q80XJ2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Gm6659-201ENSMUST00000174752 547 ntBASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf168Q80XJ2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf168Q80XJ2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms