Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Gm10517-202ENSMUST00000192970 758 ntBASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Gm18101-201ENSMUST00000215769 548 ntBASIC17.72■□□□□ 0.43
Nrde2Q80XC6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Gm18032-201ENSMUST00000222541 538 ntBASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nrde2Q80XC6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Gm6345-202ENSMUST00000180900 204 ntBASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nrde2Q80XC6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nrde2Q80XC6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nrde2Q80XC6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nrde2Q80XC6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nrde2Q80XC6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nrde2Q80XC6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nrde2Q80XC6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nrde2Q80XC6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nrde2Q80XC6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nrde2Q80XC6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms