Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Usp8Q80U87 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.52■□□□□ 0.4
Usp8Q80U87 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp8Q80U87 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp8Q80U87 Gm26524-201ENSMUST00000192339 390 ntBASIC17.52■□□□□ 0.4
Usp8Q80U87 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Usp8Q80U87 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp8Q80U87 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp8Q80U87 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp8Q80U87 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp8Q80U87 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp8Q80U87 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Usp8Q80U87 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp8Q80U87 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Usp8Q80U87 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Usp8Q80U87 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp8Q80U87 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp8Q80U87 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp8Q80U87 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Usp8Q80U87 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp8Q80U87 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp8Q80U87 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp8Q80U87 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp8Q80U87 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp8Q80U87 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp8Q80U87 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp8Q80U87 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.51■□□□□ 0.39
Usp8Q80U87 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Usp8Q80U87 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp8Q80U87 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp8Q80U87 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp8Q80U87 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Gm2399-201ENSMUST00000104944 225 ntBASIC17.5■□□□□ 0.39
Usp8Q80U87 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp8Q80U87 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp8Q80U87 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp8Q80U87 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Gm12933-201ENSMUST00000120203 872 ntBASIC17.49■□□□□ 0.39
Usp8Q80U87 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp8Q80U87 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp8Q80U87 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.49■□□□□ 0.39
Usp8Q80U87 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp8Q80U87 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp8Q80U87 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp8Q80U87 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Usp8Q80U87 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Usp8Q80U87 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp8Q80U87 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp8Q80U87 Gm44549-201ENSMUST00000208351 577 ntBASIC17.48■□□□□ 0.39
Usp8Q80U87 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp8Q80U87 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp8Q80U87 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.48■□□□□ 0.39
Usp8Q80U87 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp8Q80U87 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.47■□□□□ 0.39
Usp8Q80U87 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp8Q80U87 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp8Q80U87 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms