Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm19721-201ENSMUST00000195284 1764 ntBASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Gm13884-201ENSMUST00000118103 829 ntBASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Gm27459-201ENSMUST00000184860 107 ntBASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Gm28659-201ENSMUST00000188013 759 ntBASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rpap1Q80TE0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rpap1Q80TE0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rpap1Q80TE0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC27.11■■□□□ 1.93
Rpap1Q80TE0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC27.11■■□□□ 1.93
Rpap1Q80TE0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rpap1Q80TE0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC27.11■■□□□ 1.93
Rpap1Q80TE0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC27.11■■□□□ 1.93
Rpap1Q80TE0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rpap1Q80TE0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Rpap1Q80TE0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Rpap1Q80TE0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC27.1■■□□□ 1.93
Rpap1Q80TE0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC27.1■■□□□ 1.93
Rpap1Q80TE0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Rpap1Q80TE0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
Rpap1Q80TE0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rpap1Q80TE0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rpap1Q80TE0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Gm45141-201ENSMUST00000206502 1888 ntBASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Gm6443-201ENSMUST00000203599 874 ntBASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Gm5867-201ENSMUST00000063197 592 ntBASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Rpap1Q80TE0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Rpap1Q80TE0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC27.08■■□□□ 1.93
Rpap1Q80TE0 AC124569.2-201ENSMUST00000225998 818 ntBASIC27.08■■□□□ 1.93
Rpap1Q80TE0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rpap1Q80TE0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Rpap1Q80TE0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rpap1Q80TE0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rpap1Q80TE0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rpap1Q80TE0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rpap1Q80TE0 Gm5864-201ENSMUST00000202263 970 ntBASIC27.07■■□□□ 1.92
Rpap1Q80TE0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rpap1Q80TE0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC27.07■■□□□ 1.92
Rpap1Q80TE0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rpap1Q80TE0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rpap1Q80TE0 Mir8098-201ENSMUST00000184011 137 ntBASIC27.07■■□□□ 1.92
Rpap1Q80TE0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 AC122351.1-201ENSMUST00000220467 126 ntBASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rpap1Q80TE0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Gm25925-201ENSMUST00000158314 306 ntBASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rpap1Q80TE0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Rpap1Q80TE0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rpap1Q80TE0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Rpap1Q80TE0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
Rpap1Q80TE0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rpap1Q80TE0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rpap1Q80TE0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC27.04■■□□□ 1.92
Rpap1Q80TE0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms