Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38bQ80SY5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38bQ80SY5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Prpf38bQ80SY5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38bQ80SY5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Gm27463-201ENSMUST00000183569 57 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms