Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Gm6139-201ENSMUST00000079261 882 ntBASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.81■□□□□ 0.28
Rfx4Q7TNK1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx4Q7TNK1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Gm13216-201ENSMUST00000117145 591 ntBASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.79■□□□□ 0.28
Rfx4Q7TNK1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx4Q7TNK1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rfx4Q7TNK1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms