Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Mir6349-201ENSMUST00000184059 97 ntBASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ssx9Q6XAS3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Gm15039-201ENSMUST00000118914 875 ntBASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssx9Q6XAS3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Gm12896-201ENSMUST00000118430 226 ntBASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.4■□□□□ 0.38
Ssx9Q6XAS3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ssx9Q6XAS3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ssx9Q6XAS3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ssx9Q6XAS3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssx9Q6XAS3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssx9Q6XAS3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms