Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ShbQ6PD21 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShbQ6PD21 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShbQ6PD21 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ShbQ6PD21 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ShbQ6PD21 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.93■□□□□ 0.62
ShbQ6PD21 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
ShbQ6PD21 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.93■□□□□ 0.62
ShbQ6PD21 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.93■□□□□ 0.62
ShbQ6PD21 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.93■□□□□ 0.62
ShbQ6PD21 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShbQ6PD21 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.92■□□□□ 0.62
ShbQ6PD21 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.92■□□□□ 0.62
ShbQ6PD21 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShbQ6PD21 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShbQ6PD21 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.92■□□□□ 0.62
ShbQ6PD21 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.92■□□□□ 0.62
ShbQ6PD21 Mir5131-201ENSMUST00000175426 93 ntBASIC18.92■□□□□ 0.62
ShbQ6PD21 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ShbQ6PD21 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShbQ6PD21 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShbQ6PD21 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ShbQ6PD21 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShbQ6PD21 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.91■□□□□ 0.62
ShbQ6PD21 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.91■□□□□ 0.62
ShbQ6PD21 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ShbQ6PD21 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShbQ6PD21 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
ShbQ6PD21 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShbQ6PD21 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.9■□□□□ 0.62
ShbQ6PD21 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ShbQ6PD21 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.9■□□□□ 0.62
ShbQ6PD21 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.9■□□□□ 0.62
ShbQ6PD21 Gm6376-201ENSMUST00000209407 580 ntBASIC18.9■□□□□ 0.62
ShbQ6PD21 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.9■□□□□ 0.62
ShbQ6PD21 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShbQ6PD21 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShbQ6PD21 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShbQ6PD21 BC021767-201ENSMUST00000126387 1716 ntBASIC18.9■□□□□ 0.62
ShbQ6PD21 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShbQ6PD21 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.9■□□□□ 0.62
ShbQ6PD21 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShbQ6PD21 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ShbQ6PD21 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ShbQ6PD21 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ShbQ6PD21 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.9■□□□□ 0.62
ShbQ6PD21 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShbQ6PD21 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ShbQ6PD21 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
ShbQ6PD21 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
ShbQ6PD21 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ShbQ6PD21 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShbQ6PD21 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShbQ6PD21 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ShbQ6PD21 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShbQ6PD21 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ShbQ6PD21 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.89■□□□□ 0.61
ShbQ6PD21 Gm12350-201ENSMUST00000121208 462 ntBASIC18.89■□□□□ 0.61
ShbQ6PD21 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ShbQ6PD21 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.89■□□□□ 0.61
ShbQ6PD21 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShbQ6PD21 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.89■□□□□ 0.61
ShbQ6PD21 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShbQ6PD21 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ShbQ6PD21 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShbQ6PD21 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
ShbQ6PD21 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShbQ6PD21 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ShbQ6PD21 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShbQ6PD21 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShbQ6PD21 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.88■□□□□ 0.61
ShbQ6PD21 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.88■□□□□ 0.61
ShbQ6PD21 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ShbQ6PD21 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
ShbQ6PD21 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShbQ6PD21 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ShbQ6PD21 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.88■□□□□ 0.61
ShbQ6PD21 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms