Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd3Q6P9Z1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd3Q6P9Z1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd3Q6P9Z1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd3Q6P9Z1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smarcd3Q6P9Z1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.04■□□□□ 0.16
Smarcd3Q6P9Z1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcd3Q6P9Z1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd3Q6P9Z1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd3Q6P9Z1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd3Q6P9Z1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd3Q6P9Z1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd3Q6P9Z1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcd3Q6P9Z1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Gm7290-201ENSMUST00000104990 617 ntBASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Gm12918-201ENSMUST00000120234 636 ntBASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Gm15710-201ENSMUST00000121821 636 ntBASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Gm5075-201ENSMUST00000196916 622 ntBASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Gm7291-201ENSMUST00000199147 382 ntBASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd3Q6P9Z1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd3Q6P9Z1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcd3Q6P9Z1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16■□□□□ 0.15
Smarcd3Q6P9Z1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd3Q6P9Z1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd3Q6P9Z1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms