Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Gm12527-201ENSMUST00000117967 564 ntBASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sp140Q6NSQ5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Sp140Q6NSQ5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Gm13158-201ENSMUST00000122007 736 ntBASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sp140Q6NSQ5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sp140Q6NSQ5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Gm29257-201ENSMUST00000186115 639 ntBASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.7■□□□□ 0.42
Sp140Q6NSQ5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sp140Q6NSQ5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sp140Q6NSQ5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sp140Q6NSQ5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sp140Q6NSQ5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sp140Q6NSQ5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sp140Q6NSQ5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms